| # | Rider | Team | Time | Gap |
|---|---|---|---|---|
| 1 | Jonathan Castroviejo | Euskaltel-Euskadi | 00:03:30 | |
| 2 | Taylor Phinney | BMC Racing Team | + 00 | |
| 3 | Leigh Howard | Team HTC - Highroad | + 01 | + 01 |
| 4 | Geoffroy Lequatre | Team RadioShack | + 02 | + 02 |
| 5 | David Millar | Garmin-Cervélo | + 02 | + 02 |
| 6 | Dennis van Winden | Rabobank | + 03 | + 03 |
| 7 | Patrick Gretsch | Team HTC - Highroad | + 03 | + 03 |
| 8 | Mark Renshaw | Team HTC - Highroad | + 04 | + 04 |
| 9 | Alexandre Vinokourov | Pro Team Astana | + 04 | + 04 |
| 10 | Daniele Bennati | Leopard-Trek | + 04 | + 04 |
| 11 | Gorka Verdugo | Euskaltel-Euskadi | + 04 | + 04 |
| 12 | Vladimir Gusev | Katusha Team | + 05 | + 05 |
| 13 | Geraint Thomas | Sky ProCycling | + 05 | + 05 |
| 14 | Rick Flens | Rabobank | + 05 | + 05 |
| 15 | Richie Porte | Saxo Bank - SunGard | + 06 | + 06 |
| 16 | Lieuwe Westra | Vacansoleil - DCM Pro Cycling Team | + 06 | + 06 |
| 17 | Adam Blythe | Omega Pharma-Lotto | + 07 | + 07 |
| 18 | Matthias Brändle | Geox-TMC | + 07 | + 07 |
| 19 | Tom Stamsnijder | Leopard-Trek | + 07 | + 07 |
| 20 | Haimar Zubeldia | Team RadioShack | + 07 | + 07 |
| 21 | David Le Lay | AG2R La Mondiale | + 07 | + 07 |
| 22 | Marc de Maar | Quick Step | + 07 | + 07 |
| 23 | Sebastien Rosseler | Team RadioShack | + 08 | + 08 |
| 24 | Steve Morabito | BMC Racing Team | + 08 | + 08 |
| 25 | Cadel Evans | BMC Racing Team | + 08 | + 08 |
| 26 | Dmitriy Muravyev | Team RadioShack | + 08 | + 08 |
| 27 | Gerald Ciolek | Quick Step | + 08 | + 08 |
| 28 | Nicolas Roche | AG2R La Mondiale | + 08 | + 08 |
| 29 | Ben Swift | Sky ProCycling | + 08 | + 08 |
| 30 | Oliver Zaugg | Leopard-Trek | + 09 | + 09 |
| 31 | Ion Izagirre | Euskaltel-Euskadi | + 09 | + 09 |
| 32 | Michael Mørkøv | Saxo Bank - SunGard | + 09 | + 09 |
| 33 | Fumiyuki Beppu | Team RadioShack | + 09 | + 09 |
| 34 | Manuel Cardoso | Team RadioShack | + 09 | + 09 |
| 35 | Tony Martin | Team HTC - Highroad | + 09 | + 09 |
| 36 | David Zabriskie | Garmin-Cervélo | + 09 | + 09 |
| 37 | Francis de Greef | Omega Pharma-Lotto | + 09 | + 09 |
| 38 | Jean-christophe Péraud | AG2R La Mondiale | + 09 | + 09 |
| 39 | Pieter Weening | Rabobank | + 09 | + 09 |
| 40 | Jesus Herrada | Movistar Team | + 10 | + 10 |
| 41 | Martijn Keizer | Vacansoleil - DCM Pro Cycling Team | + 10 | + 10 |
| 42 | Thomas Rohregger | Leopard-Trek | + 10 | + 10 |
| 43 | Luke Roberts | Saxo Bank - SunGard | + 10 | + 10 |
| 44 | Marcel Wyss | Geox-TMC | + 10 | + 10 |
| 45 | Enrico Gasparotto | Pro Team Astana | + 10 | + 10 |
| 46 | Silva Pires Bruno | Leopard-Trek | + 10 | + 10 |
| 47 | Tom Leezer | Rabobank | + 10 | + 10 |
| 48 | Christophe Kern | Team Europcar | + 11 | + 11 |
| 49 | Johann Tschopp | BMC Racing Team | + 11 | + 11 |
| 50 | Roman Kreuziger | Pro Team Astana | + 11 | + 11 |
| 51 | Cameron Meyer | Garmin-Cervélo | + 11 | + 11 |
| 52 | Bart de Clercq | Omega Pharma-Lotto | + 11 | + 11 |
| 53 | Simon Spilak | Lampre-ISD | + 11 | + 11 |
| 54 | Julien Loubet | AG2R La Mondiale | + 11 | + 11 |
| 55 | Danilo Wyss | BMC Racing Team | + 11 | + 11 |
| 56 | David López | Movistar Team | + 11 | + 11 |
| 57 | Jurgen van de Walle | Omega Pharma-Lotto | + 11 | + 11 |
| 58 | Tom Danielson | Garmin-Cervélo | + 11 | + 11 |
| 59 | Egoi Martinez | Euskaltel-Euskadi | + 11 | + 11 |
| 60 | Jérôme Cousin | Team Europcar | + 11 | + 11 |
| 61 | Linus Gerdemann | Leopard-Trek | + 12 | + 12 |
| 62 | Frantisek Rabon | Team HTC - Highroad | + 12 | + 12 |
| 63 | Vicente García José | Movistar Team | + 12 | + 12 |
| 64 | Ben Hermans | Team RadioShack | + 12 | + 12 |
| 65 | Joost van Leijen | Vacansoleil - DCM Pro Cycling Team | + 12 | + 12 |
| 66 | Paolo Tiralongo | Pro Team Astana | + 12 | + 12 |
| 67 | Ignatas Konovalovas | Movistar Team | + 12 | + 12 |
| 68 | Pierre Rolland | Team Europcar | + 12 | + 12 |
| 69 | Michael Schär | BMC Racing Team | + 12 | + 12 |
| 70 | Alan Perez Lezaun | Euskaltel-Euskadi | + 12 | + 12 |
| 71 | Benjamin Noval | Saxo Bank - SunGard | + 13 | + 13 |
| 72 | Maarten Neyens | Omega Pharma-Lotto | + 13 | + 13 |
| 73 | Marco Pinotti | Team HTC - Highroad | + 13 | + 13 |
| 74 | Benat Intxausti | Movistar Team | + 13 | + 13 |
| 75 | Ivan Santaromita | BMC Racing Team | + 13 | + 13 |
| 76 | Fabio Sabatini | Liquigas-Cannondale | + 13 | + 13 |
| 77 | Bradley Wiggins | Sky ProCycling | + 13 | + 13 |
| 78 | Alan Marangoni | Liquigas-Cannondale | + 13 | + 13 |
| 79 | Santo Anzà | Vacansoleil - DCM Pro Cycling Team | + 13 | + 13 |
| 80 | Andrey Kashechkin | Lampre-ISD | + 13 | + 13 |
| 81 | Steven Kruijswijk | Rabobank | + 13 | + 13 |
| 82 | Mikhail Ignatiev | Katusha Team | + 13 | + 13 |
| 83 | Jack Bobridge | Garmin-Cervélo | + 13 | + 13 |
| 84 | Chris Sutton | Sky ProCycling | + 13 | + 13 |
| 85 | Davide Vigano | Leopard-Trek | + 13 | + 13 |
| 86 | Matteo Carrara | Vacansoleil - DCM Pro Cycling Team | + 14 | + 14 |
| 87 | Brice Feillu | Leopard-Trek | + 14 | + 14 |
| 88 | Chris Froome | Sky ProCycling | + 14 | + 14 |
| 89 | Damiano Cunego | Lampre-ISD | + 14 | + 14 |
| 90 | David Loosli | Lampre-ISD | + 14 | + 14 |
| 91 | Mauricio Ardila | Geox-TMC | + 14 | + 14 |
| 92 | León Sánchez Luis | Rabobank | + 14 | + 14 |
| 93 | Alessandro Vanotti | Liquigas-Cannondale | + 14 | + 14 |
| 94 | Stef Clement | Rabobank | + 14 | + 14 |
| 95 | Wouter Mol | Vacansoleil - DCM Pro Cycling Team | + 14 | + 14 |
| 96 | Manuele Mori | Lampre-ISD | + 15 | + 15 |
| 97 | Pavel Brutt | Katusha Team | + 15 | + 15 |
| 98 | Vladimir Karpets | Katusha Team | + 15 | + 15 |
| 99 | Oleksandr Kvachuk | Lampre-ISD | + 15 | + 15 |
| 100 | Kevin de Weert | Quick Step | + 15 | + 15 |
| 101 | Yukiya Arashiro | Team Europcar | + 15 | + 15 |
| 102 | Michael Barry | Sky ProCycling | + 15 | + 15 |
| 103 | Sylwester Szmyd | Liquigas-Cannondale | + 15 | + 15 |
| 104 | Simone Ponzi | Liquigas-Cannondale | + 16 | + 16 |
| 105 | Paolo Longo Borghini | Liquigas-Cannondale | + 16 | + 16 |
| 106 | Rob Ruijgh | Vacansoleil - DCM Pro Cycling Team | + 16 | + 16 |
| 107 | Janez Brajkovic | Team RadioShack | + 16 | + 16 |
| 108 | Addy Engels | Quick Step | + 16 | + 16 |
| 109 | Perrig Quemeneur | Team Europcar | + 16 | + 16 |
| 110 | Alexandr Pliuschin | Katusha Team | + 16 | + 16 |
| 111 | Branislau Samoilau | Movistar Team | + 16 | + 16 |
| 112 | Cyril Gautier | Team Europcar | + 16 | + 16 |
| 113 | Ivan Basso | Liquigas-Cannondale | + 16 | + 16 |
| 114 | Kanstantsin Sivtsov | Team HTC - Highroad | + 16 | + 16 |
| 115 | Jan Tratnik | Quick Step | + 17 | + 17 |
| 116 | Amaël Moinard | BMC Racing Team | + 17 | + 17 |
| 117 | Maxime Bouet | AG2R La Mondiale | + 17 | + 17 |
| 118 | Mirco Lorenzetto | Pro Team Astana | + 17 | + 17 |
| 119 | Gorazd Stangelj | Pro Team Astana | + 17 | + 17 |
| 120 | Matthew Wilson | Garmin-Cervélo | + 17 | + 17 |
| 121 | Marco Bandiera | Quick Step | + 17 | + 17 |
| 122 | Enrique Sanz | Movistar Team | + 17 | + 17 |
| 123 | Artem Ovechkin | Katusha Team | + 18 | + 18 |
| 124 | Óscar Freire | Rabobank | + 18 | + 18 |
| 125 | Kevin Seeldraeyers | Quick Step | + 18 | + 18 |
| 126 | Francesco Chicchi | Quick Step | + 18 | + 18 |
| 127 | Matteo Bono | Lampre-ISD | + 18 | + 18 |
| 128 | Dario Cioni | Sky ProCycling | + 19 | + 19 |
| 129 | Anthony Charteau | Team Europcar | + 19 | + 19 |
| 130 | Ivan Velasco | Euskaltel-Euskadi | + 19 | + 19 |
| 131 | Rafal Majka | Saxo Bank - SunGard | + 19 | + 19 |
| 132 | Volodymir Gustov | Saxo Bank - SunGard | + 21 | + 21 |
| 133 | Peter Stetina | Garmin-Cervélo | + 21 | + 21 |
| 134 | Amets Txurruka | Euskaltel-Euskadi | + 21 | + 21 |
| 135 | Giampaolo Cheula | Geox-TMC | + 21 | + 21 |
| 136 | Aleksandr Kuschynski | Katusha Team | + 21 | + 21 |
| 137 | Denis Menchov | Geox-TMC | + 21 | + 21 |
| 138 | Noe Gianetti | Geox-TMC | + 21 | + 21 |
| 139 | Bert Grabsch | Team HTC - Highroad | + 21 | + 21 |
| 140 | John Gadret | AG2R La Mondiale | + 21 | + 21 |
| 141 | Anker Sørensen Chris | Saxo Bank - SunGard | + 23 | + 23 |
| 142 | Oscar Pujol | Omega Pharma-Lotto | + 23 | + 23 |
| 143 | Robert Kiserlovski | Pro Team Astana | + 23 | + 23 |
| 144 | Koldo Fernandez | Euskaltel-Euskadi | + 23 | + 23 |
| 145 | Mathieu Perget | AG2R La Mondiale | + 24 | + 24 |
| 146 | Nicki Sørensen | Saxo Bank - SunGard | + 26 | + 26 |
| 147 | Tiziano Dall'antonia | Liquigas-Cannondale | + 27 | + 27 |
| 148 | Petr Ignatenko | Katusha Team | + 27 | + 27 |
| 149 | Morris Possoni | Sky ProCycling | + 29 | + 29 |
| 150 | Marco Corti | Geox-TMC | + 30 | + 30 |
| 151 | Rui Costa | Movistar Team | + 39 | + 39 |
| 152 | Maxim Iglinskiy | Pro Team Astana | + 41 | + 41 |
| 153 | Mikaël Chérel | AG2R La Mondiale | + 42 | + 42 |
| 154 | Dmitriy Kozontchuk | Geox-TMC | + 54 | + 54 |
| 155 | Andrew Talansky | Garmin-Cervélo | + 01:02 | + 01:02 |