| # | Rider | Team | Time | Gap |
|---|---|---|---|---|
| 1 | Vincenzo Nibali | Astana Pro Team | 84:53:28 | |
| 2 | Rigoberto Uran | Sky ProCycling | + 04:43 | + 04:43 |
| 3 | Cadel Evans | BMC Racing Team | + 05:52 | + 05:52 |
| 4 | Michele Scarponi | Lampre-Merida | + 06:48 | + 06:48 |
| 5 | Carlos Betancur | AG2R La Mondiale | + 07:28 | + 07:28 |
| 6 | Przemyslaw Niemiec | Lampre-Merida | + 07:43 | + 07:43 |
| 7 | Rafal Majka | Team Saxo - Tinkoff | + 08:09 | + 08:09 |
| 8 | Benat Intxausti | Movistar Team | + 10:26 | + 10:26 |
| 9 | Mauro Santambrogio | Vini Fantini - Selle Italia | + 10:32 | + 10:32 |
| 10 | Domenico Pozzovivo | AG2R La Mondiale | + 10:59 | + 10:59 |
| 11 | Franco Pellizotti | Androni Giocattoli - Venezuela | + 11:35 | + 11:35 |
| 12 | Samuel Sánchez | Euskaltel-Euskadi | + 12:13 | + 12:13 |
| 13 | Yury Trofimov | Katusha Team | + 12:55 | + 12:55 |
| 14 | Tanel Kangert | Astana Pro Team | + 12:57 | + 12:57 |
| 15 | Robert Kiserlovski | RadioShack-Leopard | + 14:27 | + 14:27 |
| 16 | Sergio Henao | Sky ProCycling | + 18:19 | + 18:19 |
| 17 | Wilco Kelderman | Belkin Pro Cycling Team | + 20:18 | + 20:18 |
| 18 | Darwin Atapuma | Colombia | + 28:56 | + 28:56 |
| 19 | Damiano Caruso | Cannondale Pro Cycling | + 30:56 | + 30:56 |
| 20 | Francis Mourey | FDJ.fr | + 32:22 | + 32:22 |
| 21 | Francis de Greef | Lotto - Belisol | + 33:20 | + 33:20 |
| 22 | Egoi Martinez | Euskaltel-Euskadi | + 37:14 | + 37:14 |
| 23 | Evgeni Petrov | Team Saxo - Tinkoff | + 38:09 | + 38:09 |
| 24 | Diego Rosa | Androni Giocattoli - Venezuela | + 40:23 | + 40:23 |
| 25 | Jose Herrada | Movistar Team | + 40:34 | + 40:34 |
| 26 | Steven Kruijswijk | Belkin Pro Cycling Team | + 42:36 | + 42:36 |
| 27 | José Serpa | Lampre-Merida | + 44:17 | + 44:17 |
| 28 | Fabio Duarte | Colombia | + 47:37 | + 47:37 |
| 29 | Rafael Valls | Vacansoleil - DCM Pro Cycling Team | + 54:29 | + 54:29 |
| 30 | Ivan Santaromita | BMC Racing Team | + 56:52 | + 56:52 |
| 31 | Manuel Garate Juan | Belkin Pro Cycling Team | + 58:21 | + 58:21 |
| 32 | Hubert Dupont | AG2R La Mondiale | + 01:02:05 | + 01:02:05 |
| 33 | Jorge Azanza | Euskaltel-Euskadi | + 01:07:21 | + 01:07:21 |
| 34 | Steve Morabito | BMC Racing Team | + 01:10:16 | + 01:10:16 |
| 35 | Giovanni Visconti | Movistar Team | + 01:10:47 | + 01:10:47 |
| 36 | Tiago Machado | RadioShack-Leopard | + 01:12:10 | + 01:12:10 |
| 37 | Kanstantsin Sivtsov | Sky ProCycling | + 01:13:17 | + 01:13:17 |
| 38 | Pieter Weening | Orica - GreenEDGE | + 01:17:18 | + 01:17:18 |
| 39 | Valerio Agnoli | Astana Pro Team | + 01:18:46 | + 01:18:46 |
| 40 | Petr Ignatenko | Katusha Team | + 01:20:46 | + 01:20:46 |
| 41 | Giampaolo Caruso | Katusha Team | + 01:22:00 | + 01:22:00 |
| 42 | Fabio Aru | Astana Pro Team | + 01:24:53 | + 01:24:53 |
| 43 | Fabio Felline | Androni Giocattoli - Venezuela | + 01:30:59 | + 01:30:59 |
| 44 | Stefano Pirazzi | Bardiani Valvole - CSF Inox | + 01:33:42 | + 01:33:42 |
| 45 | Angel Rubiano Miguel | Androni Giocattoli - Venezuela | + 01:34:47 | + 01:34:47 |
| 46 | Jarlinson Pantano | Colombia | + 01:35:37 | + 01:35:37 |
| 47 | Vladimir Karpets | Movistar Team | + 01:36:00 | + 01:36:00 |
| 48 | Stef Clement | Belkin Pro Cycling Team | + 01:38:38 | + 01:38:38 |
| 49 | Tom Danielson | Garmin - Sharp | + 01:39:17 | + 01:39:17 |
| 50 | Jackson Rodriguez | Androni Giocattoli - Venezuela | + 01:39:22 | + 01:39:22 |
| 51 | Ben Gastauer | AG2R La Mondiale | + 01:40:31 | + 01:40:31 |
| 52 | Peter Stetina | Garmin - Sharp | + 01:42:37 | + 01:42:37 |
| 53 | Thomas Damuseau | Team Argos - Shimano | + 01:42:54 | + 01:42:54 |
| 54 | Rob Ruijgh | Vacansoleil - DCM Pro Cycling Team | + 01:44:41 | + 01:44:41 |
| 55 | Matteo Rabottini | Vini Fantini - Selle Italia | + 01:44:44 | + 01:44:44 |
| 56 | Simone Stortoni | Lampre-Merida | + 01:47:10 | + 01:47:10 |
| 57 | Dario Cataldo | Sky ProCycling | + 01:49:35 | + 01:49:35 |
| 58 | Emanuele Sella | Androni Giocattoli - Venezuela | + 01:52:02 | + 01:52:02 |
| 59 | Luca Paolini | Katusha Team | + 01:57:35 | + 01:57:35 |
| 60 | Christian Knees | Sky ProCycling | + 01:59:02 | + 01:59:02 |
| 61 | Silva Pires Bruno | Team Saxo - Tinkoff | + 01:59:27 | + 01:59:27 |
| 62 | Michal Golas | Omega Pharma - Quick Step | + 02:03:06 | + 02:03:06 |
| 63 | Paul Martens | Belkin Pro Cycling Team | + 02:04:25 | + 02:04:25 |
| 64 | Gorka Verdugo | Euskaltel-Euskadi | + 02:04:57 | + 02:04:57 |
| 65 | Vladimir Gusev | Katusha Team | + 02:05:07 | + 02:05:07 |
| 66 | Francisco Ventoso | Movistar Team | + 02:05:43 | + 02:05:43 |
| 67 | Paolo Longo Borghini | Cannondale Pro Cycling | + 02:06:59 | + 02:06:59 |
| 68 | Kristijan Durasek | Lampre-Merida | + 02:08:02 | + 02:08:02 |
| 69 | Patrick Gretsch | Team Argos - Shimano | + 02:08:14 | + 02:08:14 |
| 70 | Eros Capecchi | Movistar Team | + 02:11:19 | + 02:11:19 |
| 71 | Manuel Bongiorno Francesco | Bardiani Valvole - CSF Inox | + 02:12:04 | + 02:12:04 |
| 72 | Adam Hansen | Lotto - Belisol | + 02:14:40 | + 02:14:40 |
| 73 | Salvatore Puccio | Sky ProCycling | + 02:15:01 | + 02:15:01 |
| 74 | Jens Keukeleire | Orica - GreenEDGE | + 02:16:21 | + 02:16:21 |
| 75 | Dominique Rollin | FDJ.fr | + 02:17:45 | + 02:17:45 |
| 76 | Marco Marcato | Vacansoleil - DCM Pro Cycling Team | + 02:17:54 | + 02:17:54 |
| 77 | Serge Pauwels | Omega Pharma - Quick Step | + 02:20:10 | + 02:20:10 |
| 78 | Koen de Kort | Team Argos - Shimano | + 02:20:49 | + 02:20:49 |
| 79 | Leonardo Duque | Colombia | + 02:21:24 | + 02:21:24 |
| 80 | Daniele Pietropolli | Lampre-Merida | + 02:21:51 | + 02:21:51 |
| 81 | Nelson Oliveira | RadioShack-Leopard | + 02:25:34 | + 02:25:34 |
| 82 | Xabier Zandio | Sky ProCycling | + 02:26:25 | + 02:26:25 |
| 83 | Fredrik Veuchelen | Vacansoleil - DCM Pro Cycling Team | + 02:31:39 | + 02:31:39 |
| 84 | Danilo Wyss | BMC Racing Team | + 02:32:56 | + 02:32:56 |
| 85 | Pablo Lastras | Movistar Team | + 02:33:46 | + 02:33:46 |
| 86 | Cristiano Salerno | Cannondale Pro Cycling | + 02:34:25 | + 02:34:25 |
| 87 | Ramunas Navardauskas | Garmin - Sharp | + 02:34:27 | + 02:34:27 |
| 88 | Alessandro Proni | Vini Fantini - Selle Italia | + 02:36:35 | + 02:36:35 |
| 89 | Sonny Colbrelli | Bardiani Valvole - CSF Inox | + 02:36:44 | + 02:36:44 |
| 90 | Fredrik Kessiakoff | Astana Pro Team | + 02:37:04 | + 02:37:04 |
| 91 | Cayetano Sarmiento Jose | Cannondale Pro Cycling | + 02:37:50 | + 02:37:50 |
| 92 | Robert Vrecer | Euskaltel-Euskadi | + 02:38:43 | + 02:38:43 |
| 93 | Fabio Sabatini | Cannondale Pro Cycling | + 02:40:29 | + 02:40:29 |
| 94 | Robinson Chalapud | Colombia | + 02:41:16 | + 02:41:16 |
| 95 | Lars Bak | Lotto - Belisol | + 02:42:00 | + 02:42:00 |
| 96 | Danilo Hondo | RadioShack-Leopard | + 02:42:21 | + 02:42:21 |
| 97 | Rory Sutherland | Team Saxo - Tinkoff | + 02:44:50 | + 02:44:50 |
| 98 | Oscar Gatto | Vini Fantini - Selle Italia | + 02:44:53 | + 02:44:53 |
| 99 | Paolo Tiralongo | Astana Pro Team | + 02:45:35 | + 02:45:35 |
| 100 | Manuele Boaro | Team Saxo - Tinkoff | + 02:46:42 | + 02:46:42 |
| 101 | Martijn Keizer | Vacansoleil - DCM Pro Cycling Team | + 02:48:45 | + 02:48:45 |
| 102 | Stefano Locatelli | Bardiani Valvole - CSF Inox | + 02:49:20 | + 02:49:20 |
| 103 | Pavel Brutt | Katusha Team | + 02:51:24 | + 02:51:24 |
| 104 | Gert Dockx | Lotto - Belisol | + 02:52:14 | + 02:52:14 |
| 105 | Gianluca Brambilla | Omega Pharma - Quick Step | + 02:52:48 | + 02:52:48 |
| 106 | Andrey Zeits | Astana Pro Team | + 02:52:59 | + 02:52:59 |
| 107 | Guillaume Bonnafond | AG2R La Mondiale | + 02:53:09 | + 02:53:09 |
| 108 | Stefano Garzelli | Vini Fantini - Selle Italia | + 02:53:18 | + 02:53:18 |
| 109 | Vicente Reynès | Lotto - Belisol | + 02:54:12 | + 02:54:12 |
| 110 | Christian Vande Velde | Garmin - Sharp | + 02:56:49 | + 02:56:49 |
| 111 | Dirk Bellemakers | Lotto - Belisol | + 02:57:11 | + 02:57:11 |
| 112 | Tobias Ludvigsson | Team Argos - Shimano | + 02:57:42 | + 02:57:42 |
| 113 | Tiziano Dall'antonia | Cannondale Pro Cycling | + 03:00:15 | + 03:00:15 |
| 114 | Alan Marangoni | Cannondale Pro Cycling | + 03:00:24 | + 03:00:24 |
| 115 | Johan Le Bon | FDJ.fr | + 03:00:57 | + 03:00:57 |
| 116 | José Cobo Juan | Movistar Team | + 03:01:32 | + 03:01:32 |
| 117 | Frederik Willems | Lotto - Belisol | + 03:03:04 | + 03:03:04 |
| 118 | Matteo Trentin | Omega Pharma - Quick Step | + 03:03:23 | + 03:03:23 |
| 119 | Elia Viviani | Cannondale Pro Cycling | + 03:04:25 | + 03:04:25 |
| 120 | Filippo Pozzato | Lampre-Merida | + 03:05:27 | + 03:05:27 |
| 121 | Brett Lancaster | Orica - GreenEDGE | + 03:06:56 | + 03:06:56 |
| 122 | George Bennett | RadioShack-Leopard | + 03:07:01 | + 03:07:01 |
| 123 | Luka Mezgec | Team Argos - Shimano | + 03:10:39 | + 03:10:39 |
| 124 | Jérôme Pineau | Omega Pharma - Quick Step | + 03:12:42 | + 03:12:42 |
| 125 | Sacha Modolo | Bardiani Valvole - CSF Inox | + 03:15:47 | + 03:15:47 |
| 126 | Mads Christensen | Team Saxo - Tinkoff | + 03:17:16 | + 03:17:16 |
| 127 | Mark Cavendish | Omega Pharma - Quick Step | + 03:19:16 | + 03:19:16 |
| 128 | Cameron Wurf | Cannondale Pro Cycling | + 03:19:38 | + 03:19:38 |
| 129 | Albert Timmer | Team Argos - Shimano | + 03:19:44 | + 03:19:44 |
| 130 | Giacomo Nizzolo | RadioShack-Leopard | + 03:19:54 | + 03:19:54 |
| 131 | Maarten Tjallingii | Belkin Pro Cycling Team | + 03:21:02 | + 03:21:02 |
| 132 | Julien Vermote | Omega Pharma - Quick Step | + 03:21:52 | + 03:21:52 |
| 133 | Yaroslav Popovych | RadioShack-Leopard | + 03:21:56 | + 03:21:56 |
| 134 | Danny Pate | Sky ProCycling | + 03:23:47 | + 03:23:47 |
| 135 | Brian Bulgac | Lotto - Belisol | + 03:25:33 | + 03:25:33 |
| 136 | Thomas Dekker | Garmin - Sharp | + 03:26:28 | + 03:26:28 |
| 137 | Nicola Boem | Bardiani Valvole - CSF Inox | + 03:29:53 | + 03:29:53 |
| 138 | Edoardo Zardini | Bardiani Valvole - CSF Inox | + 03:30:03 | + 03:30:03 |
| 139 | Marco Canola | Bardiani Valvole - CSF Inox | + 03:33:22 | + 03:33:22 |
| 140 | Daniel Oss | BMC Racing Team | + 03:34:46 | + 03:34:46 |
| 141 | Robert Hunter | Garmin - Sharp | + 03:35:17 | + 03:35:17 |
| 142 | Luke Durbridge | Orica - GreenEDGE | + 03:37:21 | + 03:37:21 |
| 143 | Christian Meier | Orica - GreenEDGE | + 03:37:26 | + 03:37:26 |
| 144 | Manuel Belletti | AG2R La Mondiale | + 03:38:31 | + 03:38:31 |
| 145 | Ricardo Mestre | Euskaltel-Euskadi | + 03:39:17 | + 03:39:17 |
| 146 | Dmitriy Gruzdev | Astana Pro Team | + 03:40:15 | + 03:40:15 |
| 147 | Murilo Fischer | FDJ.fr | + 03:40:46 | + 03:40:46 |
| 148 | Alex Dowsett | Movistar Team | + 03:40:57 | + 03:40:57 |
| 149 | Steve Cummings | BMC Racing Team | + 03:44:28 | + 03:44:28 |
| 150 | Roberto Ferrari | Lampre-Merida | + 03:46:26 | + 03:46:26 |
| 151 | Giairo Ermeti | Androni Giocattoli - Venezuela | + 03:46:45 | + 03:46:45 |
| 152 | Ioannis Tamouridis | Euskaltel-Euskadi | + 03:47:23 | + 03:47:23 |
| 153 | Jesse Sergent | RadioShack-Leopard | + 03:47:31 | + 03:47:31 |
| 154 | Svein Tuft | Orica - GreenEDGE | + 03:50:01 | + 03:50:01 |
| 155 | Maurits Lammertink | Vacansoleil - DCM Pro Cycling Team | + 03:53:10 | + 03:53:10 |
| 156 | Kenny Dehaes | Lotto - Belisol | + 03:57:40 | + 03:57:40 |
| 157 | Bert de Backer | Team Argos - Shimano | + 03:59:30 | + 03:59:30 |
| 158 | Willem Wauters | Vacansoleil - DCM Pro Cycling Team | + 04:03:29 | + 04:03:29 |
| 159 | Iljo Keisse | Omega Pharma - Quick Step | + 04:04:57 | + 04:04:57 |
| 160 | Jens Mouris | Orica - GreenEDGE | + 04:06:33 | + 04:06:33 |
| 161 | Pim Ligthart | Vacansoleil - DCM Pro Cycling Team | + 04:06:50 | + 04:06:50 |
| 162 | Wilson Marentes | Colombia | + 04:10:25 | + 04:10:25 |
| 163 | Laurent Pichon | FDJ.fr | + 04:13:50 | + 04:13:50 |
| 164 | Edwin Avila | Colombia | + 04:17:09 | + 04:17:09 |
| 165 | Rafael Andriato | Vini Fantini - Selle Italia | + 04:23:10 | + 04:23:10 |
| 166 | Miguel Minguez | Euskaltel-Euskadi | + 04:24:54 | + 04:24:54 |
| 167 | Adam Blythe | BMC Racing Team | + 04:28:23 | + 04:28:23 |
| 168 | Davide Appollonio | AG2R La Mondiale | + 04:28:36 | + 04:28:36 |