| # | Rider | Team | Time | Gap |
|---|---|---|---|---|
| 1 | Jose Lobato Juan | Euskaltel-Euskadi | 03:51:08 | |
| 2 | Armindo Fonseca | Bretagne - Séché Environnement | + 04 | + 04 |
| 3 | Egoitz Garcia | Cofidis | + 04 | + 04 |
| 4 | Danail Petrov | Caja Rural - Seguros RGA | + 04 | + 04 |
| 5 | Diego Ochoa | 4-72 Colombia | + 04 | + 04 |
| 6 | Fabio Felline | Androni Giocattoli - Venezuela | + 09 | + 09 |
| 7 | Rubén Pérez Moreno | Euskaltel-Euskadi | + 09 | + 09 |
| 8 | Erwann Corbel | Bretagne - Séché Environnement | + 14 | + 14 |
| 9 | Alessandro Malaguti | Androni Giocattoli - Venezuela | + 14 | + 14 |
| 10 | Eduardo Sepulveda | Bretagne - Séché Environnement | + 14 | + 14 |
| 11 | Renaud Dion | Bretagne - Séché Environnement | + 20 | + 20 |
| 12 | Heiner Parra | 4-72 Colombia | + 21 | + 21 |
| 13 | Arkimedes Arguelyes | Lokosphinx | + 21 | + 21 |
| 14 | Jesus Herrada | Movistar Team | + 21 | + 21 |
| 15 | Moisés Dueñas | Burgos BH - Castilla y Leon | + 24 | + 24 |
| 16 | Joao Pereira | Banco BIC - Carmim | + 26 | + 26 |
| 17 | Ever Rivera | 4-72 Colombia | + 27 | + 27 |
| 18 | Kirill Svesnikov | Lokosphinx | + 27 | + 27 |
| 19 | Dmitry Sokolov | Lokosphinx | + 27 | + 27 |
| 20 | Rémi Pauriol | Sojasun | + 29 | + 29 |
| 21 | José Oroz Juan | Euskaltel-Euskadi | + 29 | + 29 |
| 22 | Jorge Azanza | Euskaltel-Euskadi | + 33 | + 33 |
| 23 | Nicolas Paredes | 4-72 Colombia | + 35 | + 35 |
| 24 | Evgeny Shalunov | Lokosphinx | + 35 | + 35 |
| 25 | Steve Bekaert | Burgos BH - Castilla y Leon | + 36 | + 36 |
| 26 | Igor Silva | + 41 | + 41 | |
| 27 | David Livramento | Banco BIC - Carmim | + 43 | + 43 |
| 28 | Jose Herrada | Movistar Team | + 46 | + 46 |
| 29 | Mikel Landa | Euskaltel-Euskadi | + 46 | + 46 |
| 30 | Manuel Cardoso | Caja Rural - Seguros RGA | + 48 | + 48 |
| 31 | Ernesto Chamorro Juan | 4-72 Colombia | + 48 | + 48 |
| 32 | David Le Lay | Sojasun | + 54 | + 54 |
| 33 | Pablo Torres | Burgos BH - Castilla y Leon | + 54 | + 54 |
| 34 | Gorka Verdugo | Euskaltel-Euskadi | + 57 | + 57 |
| 35 | Stake Laengen Vegard | Bretagne - Séché Environnement | + 01:04 | + 01:04 |
| 36 | Iván Gutiérrez | Movistar Team | + 01:06 | + 01:06 |
| 37 | Enrique Sanz | Movistar Team | + 01:08 | + 01:08 |
| 38 | José Cobo Juan | Movistar Team | + 01:08 | + 01:08 |
| 39 | Egoi Martinez | Euskaltel-Euskadi | + 01:23 | + 01:23 |
| 40 | Emanuele Sella | Androni Giocattoli - Venezuela | + 01:31 | + 01:31 |
| 41 | Benat Intxausti | Movistar Team | + 01:31 | + 01:31 |
| 42 | Francesco Lasca | Caja Rural - Seguros RGA | + 01:31 | + 01:31 |
| 43 | Carlos Barbero | Euskadi | + 01:40 | + 01:40 |
| 44 | Jérémie Galland | Sojasun | + 01:45 | + 01:45 |
| 45 | Yannick Talabardon | Sojasun | + 01:45 | + 01:45 |
| 46 | Sergey Shilov | Lokosphinx | + 01:47 | + 01:47 |
| 47 | Javier Aramendia | Caja Rural - Seguros RGA | + 01:47 | + 01:47 |
| 48 | Romain Hardy | Cofidis | + 01:47 | + 01:47 |
| 49 | Benjamin Le Montagner | Bretagne - Séché Environnement | + 01:51 | + 01:51 |
| 50 | Benoît Jarrier | Bretagne - Séché Environnement | + 02:04 | + 02:04 |
| 51 | Nicolas Edet | Cofidis | + 02:04 | + 02:04 |
| 52 | Jonathan Castroviejo | Movistar Team | + 02:05 | + 02:05 |
| 53 | Aritz Bagües | Euskadi | + 02:05 | + 02:05 |
| 54 | Patrick Facchini | Androni Giocattoli - Venezuela | + 02:34 | + 02:34 |
| 55 | Stéphane Poulhiès | Cofidis | + 02:34 | + 02:34 |
| 56 | Matteo Di Serafino | Androni Giocattoli - Venezuela | + 02:36 | + 02:36 |
| 57 | Romain Lemarchand | Cofidis | + 02:36 | + 02:36 |
| 58 | Maxime Daniel | Sojasun | + 02:39 | + 02:39 |
| 59 | Jean-lou Paiani | Sojasun | + 02:44 | + 02:44 |
| 60 | Eloy Teruel | Movistar Team | + 03:00 | + 03:00 |
| 61 | Antonino Parrinello | Androni Giocattoli - Venezuela | + 03:25 | + 03:25 |
| 62 | Swift Metcalfe Tomas | Banco BIC - Carmim | + 06:33 | + 06:33 |
| 63 | Evaldas Siskevicius | Sojasun | + 06:33 | + 06:33 |
| 64 | Pierre-luc Périchon | Bretagne - Séché Environnement | + 06:33 | + 06:33 |
| 65 | Diego Rosa | Androni Giocattoli - Venezuela | + 06:33 | + 06:33 |
| 66 | Riccardo Chiarini | Androni Giocattoli - Venezuela | + 06:33 | + 06:33 |
| 67 | Diego Quintero Juan | 4-72 Colombia | + 06:33 | + 06:33 |
| 68 | Enzo Moyano | Caja Rural - Seguros RGA | + 06:33 | + 06:33 |
| 69 | Ramon Domene Reyes | + 06:33 | + 06:33 | |
| 70 | Omar Fraile | Caja Rural - Seguros RGA | + 06:33 | + 06:33 |
| 71 | Ilart Zuazubiskar | Euskadi | + 06:33 | + 06:33 |
| 72 | Fabrice Jeandesboz | Sojasun | + 06:33 | + 06:33 |
| 73 | Unai Iparragirre | Euskadi | + 06:33 | + 06:33 |
| 74 | Igor Merino | Euskadi | + 06:33 | + 06:33 |
| 75 | Vladimir Karpets | Movistar Team | + 06:33 | + 06:33 |
| 76 | Aleksey Rybalkin | Lokosphinx | + 06:33 | + 06:33 |
| 77 | Cyril Bessy | Cofidis | + 06:33 | + 06:33 |
| 78 | Arnaud Gérard | Bretagne - Séché Environnement | + 06:33 | + 06:33 |
| 79 | Jimmy Engoulvent | Sojasun | + 06:38 | + 06:38 |
| 80 | Rony Martias | Sojasun | + 07:32 | + 07:32 |
| 81 | Ricardo Garcia | Euskaltel-Euskadi | + 07:32 | + 07:32 |
| 82 | Arnaud Labbe | Cofidis | + 07:32 | + 07:32 |
| 83 | Haritz Orbe | Euskadi | + 07:36 | + 07:36 |
| 84 | Federico Butto | Burgos BH - Castilla y Leon | + 07:36 | + 07:36 |
| 85 | Jean-luc Delpech | Bretagne - Séché Environnement | + 07:36 | + 07:36 |
| 86 | Pello Bilbao | Euskaltel-Euskadi | + 07:36 | + 07:36 |
| 87 | Lluis Mas | Burgos BH - Castilla y Leon | + 07:36 | + 07:36 |
| 88 | Javier Moreno | Movistar Team | + 07:36 | + 07:36 |
| 89 | Pablo Lastras | Movistar Team | + 07:36 | + 07:36 |
| 90 | Walter Da Silva | + 10:22 | + 10:22 | |
| 91 | Pablo Urtasun | Euskaltel-Euskadi | + 10:51 | + 10:51 |