| # | Rider | Team | Time | Gap |
|---|---|---|---|---|
| 1 | Rural Caja | 06:12:55 | 06:12:55 | |
| 2 | Efapel Barbot - | + 08 | + 08 | + 08 |
| 3 | Guerciotti Miche - | + 14 | + 14 | + 14 |
| 4 | Antarte La - | + 34 | + 34 | + 34 |
| 5 | Une Epm - | + 34 | + 34 | + 34 |
| 6 | Rural Caja | + 01:35 | + 01:35 | + 01:35 |
| 7 | Team Movistar | + 01:40 | + 01:40 | + 01:40 |
| 8 | Une Epm - | + 02:08 | + 02:08 | + 02:08 |
| 9 | Rural Caja | + 02:22 | + 02:22 | + 02:22 |
| 10 | Team Movistar | + 02:40 | + 02:40 | + 02:40 |
| 11 | Cycling Unitedhealthcare Pro | + 02:49 | + 02:49 | + 02:49 |
| 12 | Une Epm - | + 03:32 | + 03:32 | + 03:32 |
| 13 | Euskaltel-euskadi | + 04:12 | + 04:12 | + 04:12 |
| 14 | Efapel Barbot - | + 04:20 | + 04:20 | + 04:20 |
| 15 | Team Movistar | + 04:23 | + 04:23 | + 04:23 |
| 16 | Efapel Barbot - | + 04:28 | + 04:28 | + 04:28 |
| 17 | Onda | + 04:31 | + 04:31 | + 04:31 |
| 18 | Guerciotti Miche - | + 04:36 | + 04:36 | + 04:36 |
| 20 | Granada Andalucia Caja | + 06:21 | + 06:21 | + 06:21 |
| 22 | Une Epm - | + 07:27 | + 07:27 | + 07:27 |
| 23 | Une Epm - | + 07:27 | + 07:27 | + 07:27 |
| 24 | Leon Burgos 2016 - Castilla Y | + 08:07 | + 08:07 | + 08:07 |
| 25 | Onda | + 08:10 | + 08:10 | + 08:10 |
| 26 | Efapel Barbot - | + 09:22 | + 09:22 | + 09:22 |
| 27 | Guerciotti Miche - | + 09:48 | + 09:48 | + 09:48 |
| 28 | Cycling Unitedhealthcare Pro | + 09:59 | + 09:59 | + 09:59 |
| 29 | Team Movistar | + 10:58 | + 10:58 | + 10:58 |
| 30 | Euskaltel-euskadi | + 10:58 | + 10:58 | + 10:58 |
| 31 | Continental Orbea | + 10:58 | + 10:58 | + 10:58 |
| 32 | Team Movistar | + 10:58 | + 10:58 | + 10:58 |
| 34 | Radioshack | + 11:34 | + 11:34 | + 11:34 |
| 35 | Murcia Ktm - | + 11:43 | + 11:43 | + 11:43 |
| 36 | Continental Orbea | + 12:55 | + 12:55 | + 12:55 |
| 38 | Onda | + 13:51 | + 13:51 | + 13:51 |
| 39 | Efapel Barbot - | + 14:06 | + 14:06 | + 14:06 |
| 40 | Une Epm - | + 14:08 | + 14:08 | + 14:08 |
| 41 | Cycling Unitedhealthcare Pro | + 14:29 | + 14:29 | + 14:29 |
| 42 | Antarte La - | + 16:14 | + 16:14 | + 16:14 |
| 43 | Rural Caja | + 16:44 | + 16:44 | + 16:44 |
| 44 | Team Movistar | + 18:33 | + 18:33 | + 18:33 |
| 47 | Onda | + 18:56 | + 18:56 | + 18:56 |
| 48 | Euskaltel-euskadi | + 19:15 | + 19:15 | + 19:15 |
| 50 | Efapel Barbot - | + 19:58 | + 19:58 | + 19:58 |
| 52 | Cycling Unitedhealthcare Pro | + 22:37 | + 22:37 | + 22:37 |
| 53 | Cycling Unitedhealthcare Pro | + 22:37 | + 22:37 | + 22:37 |
| 54 | Antarte La - | + 22:37 | + 22:37 | + 22:37 |
| 55 | Antarte La - | + 22:37 | + 22:37 | + 22:37 |
| 56 | Efapel Barbot - | + 22:37 | + 22:37 | + 22:37 |
| 57 | Geox-tmc | + 22:37 | + 22:37 | + 22:37 |
| 58 | Geox-tmc | + 22:37 | + 22:37 | + 22:37 |
| 59 | Antarte La - | + 22:37 | + 22:37 | + 22:37 |
| 60 | Leon Burgos 2016 - Castilla Y | + 22:37 | + 22:37 | + 22:37 |
| 61 | Antarte La - | + 22:37 | + 22:37 | + 22:37 |
| 62 | Euskaltel-euskadi | + 22:59 | + 22:59 | + 22:59 |
| 63 | Granada Andalucia Caja | + 23:11 | + 23:11 | + 23:11 |
| 64 | Continental Orbea | + 23:49 | + 23:49 | + 23:49 |
| 67 | Rural Caja | + 25:01 | + 25:01 | + 25:01 |
| 68 | Rural Caja | + 25:01 | + 25:01 | + 25:01 |
| 69 | Euskaltel-euskadi | + 25:02 | + 25:02 | + 25:02 |
| 70 | Continental Orbea | + 25:45 | + 25:45 | + 25:45 |
| 71 | Granada Andalucia Caja | + 26:39 | + 26:39 | + 26:39 |
| 72 | Geox-tmc | + 26:41 | + 26:41 | + 26:41 |
| 73 | Granada Andalucia Caja | + 27:11 | + 27:11 | + 27:11 |
| 74 | Continental Orbea | + 28:39 | + 28:39 | + 28:39 |
| 75 | Continental Orbea | + 28:39 | + 28:39 | + 28:39 |
| 76 | Guerciotti Miche - | + 30:16 | + 30:16 | + 30:16 |
| 77 | Guerciotti Miche - | + 34:11 | + 34:11 | + 34:11 |
| 79 | Efapel Barbot - | + 34:11 | + 34:11 | + 34:11 |
| 80 | Antarte La - | + 36:22 | + 36:22 | + 36:22 |
| 82 | Guerciotti Miche - | + 40:06 | + 40:06 | + 40:06 |
| 83 | Guerciotti Miche - | + 40:06 | + 40:06 | + 40:06 |
| 84 | Une Epm - | + 40:08 | + 40:08 | + 40:08 |
| 85 | Granada Andalucia Caja | + 40:08 | + 40:08 | + 40:08 |
| 86 | Rural Caja | + 40:08 | + 40:08 | + 40:08 |
| 87 | Granada Andalucia Caja | + 40:08 | + 40:08 | + 40:08 |
| 88 | Cycling Unitedhealthcare Pro | + 40:08 | + 40:08 | + 40:08 |
| 89 | Onda | + 40:08 | + 40:08 | + 40:08 |
| 91 | Onda | + 40:08 | + 40:08 | + 40:08 |
| 92 | Onda | + 40:08 | + 40:08 | + 40:08 |
| 93 | Antarte La - | + 40:08 | + 40:08 | + 40:08 |
| 94 | Une Epm - | + 40:08 | + 40:08 | + 40:08 |
| 95 | Onda | + 40:08 | + 40:08 | + 40:08 |
| 96 | Leon Burgos 2016 - Castilla Y | + 40:08 | + 40:08 | + 40:08 |
| 98 | Rural Caja | + 40:08 | + 40:08 | + 40:08 |
| 99 | Granada Andalucia Caja | + 40:08 | + 40:08 | + 40:08 |
| 100 | Continental Orbea | + 40:13 | + 40:13 | + 40:13 |
| 101 | Leon Burgos 2016 - Castilla Y | + 40:13 | + 40:13 | + 40:13 |
| 102 | Cycling Unitedhealthcare Pro | + 40:15 | + 40:15 | + 40:15 |