| # | Rider | Team | Time | Gap |
|---|---|---|---|---|
| 1 | Continental Orbea | 04:38:23 | 04:38:23 | |
| 2 | Cycling Unitedhealthcare Pro | + 11 | + 11 | + 11 |
| 3 | Team Movistar | + 38 | + 38 | + 38 |
| 4 | Euskaltel-euskadi | + 41 | + 41 | + 41 |
| 5 | Une Epm - | + 43 | + 43 | + 43 |
| 7 | Efapel Barbot - | + 43 | + 43 | + 43 |
| 8 | Antarte La - | + 43 | + 43 | + 43 |
| 9 | Onda | + 43 | + 43 | + 43 |
| 10 | Guerciotti Miche - | + 43 | + 43 | + 43 |
| 11 | Rural Caja | + 43 | + 43 | + 43 |
| 14 | Efapel Barbot - | + 43 | + 43 | + 43 |
| 15 | Antarte La - | + 48 | + 48 | + 48 |
| 16 | Continental Orbea | + 48 | + 48 | + 48 |
| 17 | Granada Andalucia Caja | + 48 | + 48 | + 48 |
| 18 | Team Movistar | + 48 | + 48 | + 48 |
| 19 | Team Movistar | + 48 | + 48 | + 48 |
| 20 | Rural Caja | + 48 | + 48 | + 48 |
| 21 | Guerciotti Miche - | + 52 | + 52 | + 52 |
| 22 | Team Movistar | + 54 | + 54 | + 54 |
| 23 | Geox-tmc | + 54 | + 54 | + 54 |
| 24 | Granada Andalucia Caja | + 54 | + 54 | + 54 |
| 25 | Granada Andalucia Caja | + 54 | + 54 | + 54 |
| 26 | Granada Andalucia Caja | + 54 | + 54 | + 54 |
| 27 | Murcia Ktm - | + 54 | + 54 | + 54 |
| 29 | Euskaltel-euskadi | + 54 | + 54 | + 54 |
| 30 | Guerciotti Miche - | + 54 | + 54 | + 54 |
| 31 | Antarte La - | + 54 | + 54 | + 54 |
| 32 | Cycling Unitedhealthcare Pro | + 54 | + 54 | + 54 |
| 33 | Leon Burgos 2016 - Castilla Y | + 54 | + 54 | + 54 |
| 34 | Continental Orbea | + 54 | + 54 | + 54 |
| 35 | Leon Burgos 2016 - Castilla Y | + 54 | + 54 | + 54 |
| 36 | Une Epm - | + 54 | + 54 | + 54 |
| 38 | Granada Andalucia Caja | + 01:00 | + 01:00 | + 01:00 |
| 40 | Cycling Unitedhealthcare Pro | + 01:00 | + 01:00 | + 01:00 |
| 41 | Onda | + 01:00 | + 01:00 | + 01:00 |
| 42 | Une Epm - | + 01:00 | + 01:00 | + 01:00 |
| 43 | Efapel Barbot - | + 01:00 | + 01:00 | + 01:00 |
| 44 | Onda | + 01:00 | + 01:00 | + 01:00 |
| 46 | Geox-tmc | + 01:00 | + 01:00 | + 01:00 |
| 48 | Efapel Barbot - | + 01:00 | + 01:00 | + 01:00 |
| 49 | Une Epm - | + 01:07 | + 01:07 | + 01:07 |
| 50 | Onda | + 01:07 | + 01:07 | + 01:07 |
| 51 | Guerciotti Miche - | + 01:07 | + 01:07 | + 01:07 |
| 52 | Granada Andalucia Caja | + 01:07 | + 01:07 | + 01:07 |
| 53 | Une Epm - | + 01:07 | + 01:07 | + 01:07 |
| 54 | Team Movistar | + 01:09 | + 01:09 | + 01:09 |
| 55 | Continental Orbea | + 01:10 | + 01:10 | + 01:10 |
| 56 | Continental Orbea | + 01:10 | + 01:10 | + 01:10 |
| 58 | Antarte La - | + 01:10 | + 01:10 | + 01:10 |
| 59 | Efapel Barbot - | + 01:10 | + 01:10 | + 01:10 |
| 60 | Efapel Barbot - | + 01:10 | + 01:10 | + 01:10 |
| 61 | Antarte La - | + 01:10 | + 01:10 | + 01:10 |
| 62 | Onda | + 01:10 | + 01:10 | + 01:10 |
| 64 | Cycling Unitedhealthcare Pro | + 01:14 | + 01:14 | + 01:14 |
| 65 | Cycling Unitedhealthcare Pro | + 01:14 | + 01:14 | + 01:14 |
| 66 | Une Epm - | + 01:17 | + 01:17 | + 01:17 |
| 67 | Une Epm - | + 01:17 | + 01:17 | + 01:17 |
| 68 | Une Epm - | + 01:17 | + 01:17 | + 01:17 |
| 69 | Rural Caja | + 01:21 | + 01:21 | + 01:21 |
| 70 | Cycling Unitedhealthcare Pro | + 01:21 | + 01:21 | + 01:21 |
| 71 | Geox-tmc | + 01:24 | + 01:24 | + 01:24 |
| 72 | Radioshack | + 01:24 | + 01:24 | + 01:24 |
| 73 | Team Movistar | + 01:24 | + 01:24 | + 01:24 |
| 74 | Euskaltel-euskadi | + 01:24 | + 01:24 | + 01:24 |
| 75 | Rural Caja | + 01:24 | + 01:24 | + 01:24 |
| 76 | Onda | + 01:24 | + 01:24 | + 01:24 |
| 77 | Guerciotti Miche - | + 01:27 | + 01:27 | + 01:27 |
| 78 | Rural Caja | + 01:32 | + 01:32 | + 01:32 |
| 79 | Granada Andalucia Caja | + 01:32 | + 01:32 | + 01:32 |
| 80 | Continental Orbea | + 01:32 | + 01:32 | + 01:32 |
| 81 | Cycling Unitedhealthcare Pro | + 01:32 | + 01:32 | + 01:32 |
| 82 | Rural Caja | + 01:32 | + 01:32 | + 01:32 |
| 83 | Continental Orbea | + 01:32 | + 01:32 | + 01:32 |
| 84 | Guerciotti Miche - | + 01:41 | + 01:41 | + 01:41 |
| 85 | Efapel Barbot - | + 01:41 | + 01:41 | + 01:41 |
| 86 | Guerciotti Miche - | + 03:59 | + 03:59 | + 03:59 |
| 87 | Onda | + 03:59 | + 03:59 | + 03:59 |
| 89 | Leon Burgos 2016 - Castilla Y | + 06:50 | + 06:50 | + 06:50 |
| 90 | Leon Burgos 2016 - Castilla Y | + 06:50 | + 06:50 | + 06:50 |
| 91 | Antarte La - | + 08:58 | + 08:58 | + 08:58 |
| 92 | Onda | + 08:58 | + 08:58 | + 08:58 |
| 93 | Antarte La - | + 08:58 | + 08:58 | + 08:58 |
| 94 | Antarte La - | + 08:58 | + 08:58 | + 08:58 |
| 96 | Rural Caja | + 08:58 | + 08:58 | + 08:58 |
| 97 | Rural Caja | + 08:58 | + 08:58 | + 08:58 |
| 99 | Efapel Barbot - | + 09:45 | + 09:45 | + 09:45 |
| 100 | Euskaltel-euskadi | + 09:45 | + 09:45 | + 09:45 |