| # | Rider | Team | Time | Gap |
|---|---|---|---|---|
| 1 | André Greipel | Team HTC - Columbia | 04:13:17 | |
| 2 | Koldo Fernandez | Euskaltel-Euskadi | + 00 | |
| 3 | Manuel Cardoso | Footon-Servetto | + 00 | |
| 4 | Joaquin Rojas José | Caisse d'Epargne | + 00 | |
| 5 | Jens Keukeleire | Cofidis | + 00 | |
| 6 | Fabian Wegmann | Team Milram | + 00 | |
| 7 | Aaen Jørgensen Jonas | Team Saxo Bank | + 00 | |
| 8 | Andreas Schillinger | Team NetApp | + 00 | |
| 9 | Rubén Pérez Moreno | Euskaltel-Euskadi | + 00 | |
| 10 | Eduard Vorganov | Team Katusha | + 00 | |
| 11 | Christian Knees | Team Milram | + 00 | |
| 12 | Jens Voigt | Team Saxo Bank | + 00 | |
| 13 | Bram Tankink | Rabobank | + 00 | |
| 14 | Jérôme Pineau | Quick Step | + 00 | |
| 15 | Vicente Reynès | Team HTC - Columbia | + 06 | + 06 |
| 16 | Laurent Didier | Team Saxo Bank | + 07 | + 07 |
| 17 | Johannes Fröhlinger | Team Milram | + 07 | + 07 |
| 18 | Iván Melero | Burgos 2016 - Castilla y Leon | + 07 | + 07 |
| 19 | Paul Voss | Team Milram | + 07 | + 07 |
| 20 | Romain Zingle | Cofidis | + 07 | + 07 |
| 21 | Antonio Piedra | Andalucía - Cajasur | + 10 | + 10 |
| 22 | Ivan Velasco | Euskaltel-Euskadi | + 10 | + 10 |
| 23 | Francis de Greef | Omega Pharma-Lotto | + 10 | + 10 |
| 24 | Luke Roberts | Team Milram | + 10 | + 10 |
| 25 | Nico Sijmens | Cofidis | + 10 | + 10 |
| 26 | David Deroo | Skil - Shimano | + 10 | + 10 |
| 27 | Daniel Moreno | Omega Pharma-Lotto | + 10 | + 10 |
| 28 | Angel Vicioso | Andalucía - Cajasur | + 10 | + 10 |
| 29 | David Vitoria | Footon-Servetto | + 10 | + 10 |
| 30 | Joan Horrach | Team Katusha | + 10 | + 10 |
| 31 | Alexandre Botcharov | Team Katusha | + 10 | + 10 |
| 32 | León Sánchez Luis | Caisse d'Epargne | + 13 | + 13 |
| 33 | Luis Pasamontes | Caisse d'Epargne | + 13 | + 13 |
| 34 | Jurgen van den Broeck | Omega Pharma-Lotto | + 13 | + 13 |
| 35 | Jan Bakelants | Omega Pharma-Lotto | + 13 | + 13 |
| 36 | Jean-christophe Péraud | Omega Pharma-Lotto | + 13 | + 13 |
| 37 | Fränk Schleck | Team Saxo Bank | + 13 | + 13 |
| 38 | André Steensen | Team Saxo Bank | + 13 | + 13 |
| 39 | Raul Santamarta Valvuena | Burgos 2016 - Castilla y Leon | + 13 | + 13 |
| 40 | Francesco Reda | Quick Step | + 13 | + 13 |
| 41 | Antonio Tauler Llull | + 17 | + 17 | |
| 42 | Mikel Landa | Orbea | + 17 | + 17 |
| 43 | Lars Boom | Rabobank | + 17 | + 17 |
| 44 | Ion Izagirre | Orbea | + 17 | + 17 |
| 45 | Nick Nuyens | Rabobank | + 17 | + 17 |
| 46 | Vasil Kiryienka | Caisse d'Epargne | + 17 | + 17 |
| 47 | Jelle Vanendert | Omega Pharma-Lotto | + 17 | + 17 |
| 48 | Frederik Wilmann | Skil - Shimano | + 17 | + 17 |
| 49 | Alexandr Kolobnev | Team Katusha | + 17 | + 17 |
| 50 | Egor Silin | Team Katusha | + 17 | + 17 |
| 51 | Laurens ten Dam | Rabobank | + 20 | + 20 |
| 52 | Maxime Monfort | Team HTC - Columbia | + 20 | + 20 |
| 53 | Anker Sørensen Chris | Team Saxo Bank | + 20 | + 20 |
| 54 | Peter Velits | Team HTC - Columbia | + 20 | + 20 |
| 55 | Rodrigo Garcia Rena | Xacobeo-Galicia | + 20 | + 20 |
| 56 | Kasper Klostergaard | Team Saxo Bank | + 20 | + 20 |
| 57 | Andrey Amador | Caisse d'Epargne | + 20 | + 20 |
| 58 | Benat Intxausti | Euskaltel-Euskadi | + 31 | + 31 |
| 59 | Vladimir Karpets | Team Katusha | + 32 | + 32 |
| 60 | Alberto Losada | Caisse d'Epargne | + 32 | + 32 |
| 61 | Markus Eibegger | Footon-Servetto | + 32 | + 32 |
| 62 | Rafael Valls | Footon-Servetto | + 32 | + 32 |
| 63 | Kim Kirchen | Team Katusha | + 32 | + 32 |
| 64 | Tejay van Garderen | Team HTC - Columbia | + 41 | + 41 |
| 65 | Maarten Tjallingii | Rabobank | + 45 | + 45 |
| 66 | Craig Lewis | Team HTC - Columbia | + 01:08 | + 01:08 |
| 67 | Jesus Rosendo Prado | Andalucía - Cajasur | + 01:53 | + 01:53 |
| 68 | Oscar Grau Jorda | Burgos 2016 - Castilla y Leon | + 01:54 | + 01:54 |
| 69 | Christophe Moreau | Caisse d'Epargne | + 04:24 | + 04:24 |
| 70 | Pablo Lastras | Caisse d'Epargne | + 04:24 | + 04:24 |
| 71 | Rasmus Guldhammer | Team HTC - Columbia | + 04:24 | + 04:24 |
| 72 | Thomas Berkhout | Van Vliet - EBH - Elshof | + 04:24 | + 04:24 |
| 73 | Frantisek Rabon | Team HTC - Columbia | + 04:24 | + 04:24 |
| 74 | Rui Costa | Caisse d'Epargne | + 04:24 | + 04:24 |
| 75 | Bert Grabsch | Team HTC - Columbia | + 04:24 | + 04:24 |
| 76 | Maxime Vantomme | Team Katusha | + 04:24 | + 04:24 |
| 77 | Iñaki Isasi | Euskaltel-Euskadi | + 04:24 | + 04:24 |
| 78 | Tom Stamsnijder | Rabobank | + 09:07 | + 09:07 |
| 79 | Tom Leezer | Rabobank | + 09:07 | + 09:07 |
| 80 | Matthias Brändle | Footon-Servetto | + 09:07 | + 09:07 |
| 81 | Gregory Brenes | Burgos 2016 - Castilla y Leon | + 09:07 | + 09:07 |
| 82 | Robbie Mcewen | Team Katusha | + 09:14 | + 09:14 |
| 83 | Joaquim Rodríguez | Team Katusha | + 09:14 | + 09:14 |
| 84 | Jakob Fuglsang | Team Saxo Bank | + 09:19 | + 09:19 |
| 85 | Francisco Pacheco Torres | Xacobeo-Galicia | + 12:15 | + 12:15 |