| # | Rider | Team | Time | Gap |
|---|---|---|---|---|
| 1 | Nathan Haas | Garmin - Sharp | 04:06:48 | |
| 2 | Edvald Boasson-hagen | Team Sky | + 00 | |
| 3 | Grega Bole | Vini Fantini - Nippo - De Rosa | + 00 | |
| 4 | Michael Valgren | Tinkoff - Saxo | + 00 | |
| 5 | Julian Arredondo | Trek Factory Racing | + 00 | |
| 6 | Valerio Conti | Lampre-Merida | + 00 | |
| 7 | Davide Formolo | Cannondale | + 00 | |
| 8 | Moreno Moser | Cannondale | + 00 | |
| 9 | Jan Polanc | Lampre-Merida | + 05 | + 05 |
| 10 | Christopher Juul-jensen | Tinkoff - Saxo | + 18 | + 18 |
| 11 | Manuele Boaro | Tinkoff - Saxo | + 25 | + 25 |
| 12 | Daniel Martin | Garmin - Sharp | + 38 | + 38 |
| 13 | Thomas Lebas | Bridgestone - Anchor | + 48 | + 48 |
| 14 | Fumiyuki Beppu | Trek Factory Racing | + 48 | + 48 |
| 15 | Nariyuki Masuda | Utsunomiya Blitzen | + 48 | + 48 |
| 16 | Steele Von Hoff | Garmin - Sharp | + 56 | + 56 |
| 17 | Chris Sutton | Team Sky | + 56 | + 56 |
| 18 | Ricardo Garcia | Team Ukyo | + 56 | + 56 |
| 19 | Bernard Sulzberger | Drapac Cycling | + 56 | + 56 |
| 20 | Paolo Longo Borghini | Cannondale | + 56 | + 56 |
| 21 | Salvador Guardiola | Team Ukyo | + 56 | + 56 |
| 22 | Taiji Nishitani | Aisan Racing Team | + 56 | + 56 |
| 23 | Sho Hatsuyama | Bridgestone - Anchor | + 56 | + 56 |
| 24 | Kohei Uchima | Bridgestone - Anchor | + 56 | + 56 |
| 25 | Cristiano Salerno | Cannondale | + 56 | + 56 |
| 26 | Yukiya Arashiro | Team Europcar | + 56 | + 56 |
| 27 | Christophe Kern | Team Europcar | + 56 | + 56 |
| 28 | Phillip Gaimon | Garmin - Sharp | + 01:02 | + 01:02 |
| 29 | Damiano Cunego | Lampre-Merida | + 01:02 | + 01:02 |
| 30 | Tomohiro Hayakawa | Aisan Racing Team | + 01:02 | + 01:02 |
| 31 | Miyataka Shimizu | Bridgestone - Anchor | + 02:01 | + 02:01 |
| 32 | Vicente Toribio Jose | Team Ukyo | + 03:11 | + 03:11 |
| 33 | Pierpaolo de Negri | Vini Fantini - Nippo - De Rosa | + 03:55 | + 03:55 |
| 34 | Elia Favilli | Lampre-Merida | + 03:55 | + 03:55 |
| 35 | Marco Marcato | Cannondale | + 03:55 | + 03:55 |
| 36 | Hayden Roulston | Trek Factory Racing | + 03:55 | + 03:55 |
| 37 | Björn Thurau | Team Europcar | + 04:25 | + 04:25 |
| 38 | Yukihiro Doi | Team Ukyo | + 04:37 | + 04:37 |
| 39 | Yusuke Hatanaka | Shimano Racing Team | + 05:05 | + 05:05 |
| 40 | Ben Swift | Team Sky | + 05:36 | + 05:36 |
| 41 | Takashi Miyazawa | Vini Fantini - Nippo - De Rosa | + 05:46 | + 05:46 |
| 42 | Karsten Kroon | Tinkoff - Saxo | + 05:48 | + 05:48 |
| 43 | Bernhard Eisel | Team Sky | + 05:48 | + 05:48 |
| 44 | Atsushi Oka | + 05:48 | + 05:48 | |
| 45 | Charles Planet | Novo Nordisk | + 05:48 | + 05:48 |
| 46 | Javier Mejias | Novo Nordisk | + 05:51 | + 05:51 |
| 47 | Kazuhiro Mori | Aisan Racing Team | + 05:51 | + 05:51 |
| 48 | Damien Monier | Bridgestone - Anchor | + 05:51 | + 05:51 |
| 49 | Ryoma Nonaka | Shimano Racing Team | + 05:51 | + 05:51 |
| 50 | Yoshimitsu Hiratsuka | Aisan Racing Team | + 05:51 | + 05:51 |
| 51 | Yuzuru Suzuki | Utsunomiya Blitzen | + 05:51 | + 05:51 |
| 52 | Wesley Sulzberger | Drapac Cycling | + 05:51 | + 05:51 |
| 53 | Lachlan Norris | Drapac Cycling | + 05:51 | + 05:51 |
| 54 | Darren Lapthorne | Drapac Cycling | + 05:51 | + 05:51 |
| 55 | Shun Yamamoto | Team Ukyo | + 05:59 | + 05:59 |
| 56 | David Lozano | Novo Nordisk | + 06:36 | + 06:36 |
| 57 | Jack Anderson | Drapac Cycling | + 06:36 | + 06:36 |
| 58 | Masakazu Ito | Aisan Racing Team | + 06:36 | + 06:36 |
| 59 | Naoya Uchino | + 06:36 | + 06:36 | |
| 60 | Shinri Suzuki | Utsunomiya Blitzen | + 06:36 | + 06:36 |
| 61 | Takayuki Abe | Utsunomiya Blitzen | + 06:57 | + 06:57 |
| 62 | Takaaki Hori | Utsunomiya Blitzen | + 09:45 | + 09:45 |
| 63 | Shotaro Iribe | Shimano Racing Team | + 09:48 | + 09:48 |
| 64 | Manabu Ishibashi | Vini Fantini - Nippo - De Rosa | + 10:40 | + 10:40 |
| 65 | Keisuke Kimura | Shimano Racing Team | + 11:52 | + 11:52 |