| # | Rider | Team | Time | Gap |
|---|---|---|---|---|
| 1 | Marco Canola | Nippo-Vini Fantini | 02:45:37 | |
| 2 | Benjami Prades | Ukyo | + 00 | |
| 3 | Takeaki Amezawa | Utsunomiya Blitzen | + 00 | |
| 4 | Antwan Tolhoek | Lotto NL-Jumbo | + 00 | |
| 5 | Thomas Lebas | Kinan | + 00 | |
| 6 | Jasper Stuyven | Trek-Segafredo | + 34 | + 34 |
| 7 | Ben Hill | Attaque Gusto | + 34 | + 34 |
| 8 | Enrico Battaglin | Lotto NL-Jumbo | + 34 | + 34 |
| 9 | Danilo Wyss | BMC Racing | + 34 | + 34 |
| 10 | Yusuke Hatanaka | Ukyo | + 34 | + 34 |
| 11 | Davide Villella | Cannondale-Drapac | + 34 | + 34 |
| 12 | Jai Crawford | Kinan | + 34 | + 34 |
| 13 | Vicente Toribio Jose | Matrix Powertag | + 34 | + 34 |
| 14 | Nathan Earle | Ukyo | + 34 | + 34 |
| 15 | Oscar Pujol | Ukyo | + 34 | + 34 |
| 16 | Ryota Nishizono | Bridgestone Anchor | + 34 | + 34 |
| 17 | Ivan Santaromita | Nippo-Vini Fantini | + 34 | + 34 |
| 18 | Sho Hatsuyama | Bridgestone Anchor | + 34 | + 34 |
| 19 | Hideto Nakane | Nippo-Vini Fantini | + 34 | + 34 |
| 20 | Alexey Vermeulen | Lotto NL-Jumbo | + 34 | + 34 |
| 21 | Masahiro Ishigami | + 01:16 | + 01:16 | |
| 22 | Charles Planet | Novo Nordisk | + 01:16 | + 01:16 |
| 23 | Naoya Yoshioka | Nasu Blasen | + 01:18 | + 01:18 |
| 24 | Koen de Kort | Trek-Segafredo | + 01:18 | + 01:18 |
| 25 | Damiano Cunego | Nippo-Vini Fantini | + 01:22 | + 01:22 |
| 26 | Koen Bouwman | Lotto NL-Jumbo | + 01:33 | + 01:33 |
| 27 | Yoshimitsu Hiratsuka | Ukyo | + 03:55 | + 03:55 |
| 28 | Keisuke Kimura | + 03:55 | + 03:55 | |
| 29 | Yasuharu Nakajima | Kinan | + 03:58 | + 03:58 |
| 30 | Hayato Okamoto | + 03:58 | + 03:58 | |
| 31 | Yukihiro Doi | Matrix Powertag | + 03:58 | + 03:58 |
| 32 | Yuzuru Suzuki | Utsunomiya Blitzen | + 03:58 | + 03:58 |
| 33 | Shotaro Iribe | + 03:58 | + 03:58 | |
| 34 | Airan Fernandez | Matrix Powertag | + 03:58 | + 03:58 |
| 35 | Manabu Ishibashi | Bridgestone Anchor | + 03:58 | + 03:58 |
| 36 | David Lozano | Novo Nordisk | + 03:58 | + 03:58 |
| 37 | Michael Schär | BMC Racing | + 03:58 | + 03:58 |
| 38 | Martin Elmiger | BMC Racing | + 03:58 | + 03:58 |
| 39 | Masayuki Shibata | Nasu Blasen | + 03:58 | + 03:58 |
| 40 | Marcos Garcia | Kinan | + 04:07 | + 04:07 |
| 41 | Jose Lobato Juan | Lotto NL-Jumbo | + 04:07 | + 04:07 |
| 42 | Fumiyuki Beppu | Trek-Segafredo | + 07:15 | + 07:15 |
| 43 | Alan Marangoni | Nippo-Vini Fantini | + 07:15 | + 07:15 |
| 44 | Genki Yamamoto | Kinan | + 07:15 | + 07:15 |
| 45 | Ryu Suzuki | Bridgestone Anchor | + 08:34 | + 08:34 |
| 46 | Alex Howes | Cannondale-Drapac | + 09:11 | + 09:11 |
| 47 | Daiki Yasuhara | Matrix Powertag | + 11:29 | + 11:29 |